Migrate live secrets to sops-nix (Milestone 2)

Audited the working tree and full git history for committed secrets
(gitleaks + trufflehog + manual grep, see secrets-inventory.md, kept
local/gitignored per the spec). Found: a password hash shared by root
and the nixos user across every host, two live Beszel monitoring
tokens, and a GitHub fine-grained PAT embedded in a home-manager
nix.conf.

Migrates all of them to sops-nix:
- .sops.yaml + secrets/*.yaml, encrypted for admin + the age keys
  derived (via ssh-to-age) from each live host's existing SSH host
  key — no new key material transferred to any machine.
- users.users.{root,nixos}.hashedPasswordFile replaces the inline
  hashedPassword shared by every target.
- The GitHub PAT moves from a home-manager-managed, store-visible
  nix.conf to a sops.templates-rendered file included via nix.conf's
  native !include, system-wide instead of per-user.
- Beszel TOKEN moves from `environment` (store-visible) to
  `environmentFile` (runtime-only via sops.templates); the dead
  commented-out docker token is removed from the tree entirely.

Added a tracked pre-commit hook (gitleaks protect --staged, wired via
core.hooksPath) so a secret can't be committed by accident again, and
documented the sops workflow in README.md.

Structural verification only: all 17 flake targets evaluate, and
`nix build --dry-run --no-link` succeeds for the three currently
deployed hosts. Per CLAUDE.md, actual `nixos-rebuild switch` — the
step that confirms secrets decrypt and services start on a real
machine — is left for manual verification.

Git history still contains the original plaintext secrets; scrubbing
history (Milestone 3) and rotating every credential (Milestone 4) are
separate, deliberately gated steps per remove-sensetive-info-refactor.md.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>

modules/common/configuration.nix

@@ -25,9 +25,31 @@
   git
   gcr
   ];
+
+  # Secrets shared by every host, decrypted at activation via each host's
+  # existing SSH host key (sops-nix derives the age key from
+  # /etc/ssh/ssh_host_ed25519_key automatically — see modules/common/README
+  # or docs/ for the sops workflow). hashedPassword/hashedPasswordFile need
+  # neededForUsers so they're available before the normal secret-activation
+  # step, since user creation happens very early in boot.
+  sops.defaultSopsFile = ../../secrets/common.yaml;
+  sops.secrets."root-hashedPassword".neededForUsers = true;
+  sops.secrets."nixos-hashedPassword".neededForUsers = true;
+  sops.secrets."nix-github-token" = { };
+
+  # nix.conf doesn't support a *File-style option for access-tokens, so the
+  # token is rendered into a runtime-only file (never touches the Nix store)
+  # and pulled in via nix.conf's native !include directive.
+  sops.templates."nix-github-token.conf".content = ''
+    access-tokens = github.com=${config.sops.placeholder."nix-github-token"}
+  '';
+  nix.extraOptions = ''
+    !include ${config.sops.templates."nix-github-token.conf".path}
+  '';
+
 #Set root password
 users.users.root = {
-  hashedPassword = "$6$Kwv9KAyvcurAViQF$H4.u3feqGE7lVoNgkFXhE3n2Pmo//9JYDTCz8ifrVHBxPjwa1xMby7tEZ8Bpt5MXs9Rkx6/YbZWxs5CpH0s/70";
+  hashedPasswordFile = config.sops.secrets."root-hashedPassword".path;
 };
 
   # Define a user account. Don't forget to set a password with ‘passwd’.
@@ -37,7 +59,7 @@ users.users.root = {
     packages = with pkgs; [
       tree
     ];
-    hashedPassword = "$6$Kwv9KAyvcurAViQF$H4.u3feqGE7lVoNgkFXhE3n2Pmo//9JYDTCz8ifrVHBxPjwa1xMby7tEZ8Bpt5MXs9Rkx6/YbZWxs5CpH0s/70";
+    hashedPasswordFile = config.sops.secrets."nixos-hashedPassword".path;
     openssh.authorizedKeys.keys = [
     "ssh-rsa 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 wayne@stream"
     "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAICMJhrfFayLBG+gWtO6oAvgambw5nWWgztiTFEaaaVRH debian@surface"

modules/common/home.nix

@@ -17,11 +17,10 @@ in {
   
 programs.bash.enable = true;
   
-  home.file = {
-    ".config/nix/nix.conf".text = ''
-      access-tokens = github.com=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
-    '';
-  };
+  # GitHub access-tokens setting used to live here in plaintext; it's now
+  # rendered system-wide from a sops-nix secret via nix.extraOptions in
+  # modules/common/configuration.nix instead (covers the daemon for every
+  # user, not just this one).
 
   # Optional: packages
   home.packages = with pkgs; [